5.1. Quality histogram a la fastQC

Get a data set example

from sequana import sequana_data

dataset = sequana_data("test.fastq.gz")

Create a FastQC instance

from sequana import FastQC

qc = FastQC(dataset, verbose=False)

plot the histogram

qc.boxplot_quality()

Total running time of the script: (0 minutes 0.198 seconds)