Gallery

General-purpose examples for sequana library. The following examples illustrates how Sequana library itself can be used to read and create some plots used within the pipelines.

Quality histogram a la fastQC

Quality histogram a la fastQC

read length histograms pacbio data

read length histograms pacbio data

BAM module example

BAM module example

Coverage module example

Coverage module example

Kraken module example

Kraken module example

Pipeline statistics

Pipeline statistics

Running median example

Running median example